mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c22h9lf3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:10:36,795 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:10:37,764 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:10:37,943 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:11:25,739 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:11:26,022 - cnv_pipe.batch.run_model - INFO - Processing cluster 879 with 197 probes
2026-06-03 06:11:26,461 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process started for cluster 879 with 197 probes
2026-06-03 06:16:49,903 - cnv_pipe.batch.run_model.cluster879 - INFO - Child process finished cluster 879. Wrote cluster_879_samples.csv and cluster_879_params.csv
2026-06-03 06:16:49,905 - cnv_pipe.batch.run_model - INFO - Cluster 879 finished in 323.88 seconds. Status: SUCCESS