mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-scvasny4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:12,841 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:11:13,749 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:11:13,938 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:03,395 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:03,643 - cnv_pipe.batch.run_model - INFO - Processing cluster 979 with 192 probes
2026-06-03 06:12:04,086 - cnv_pipe.batch.run_model.cluster979 - INFO - Child process started for cluster 979 with 192 probes
2026-06-03 06:17:21,620 - cnv_pipe.batch.run_model.cluster979 - INFO - Child process finished cluster 979. Wrote cluster_979_samples.csv and cluster_979_params.csv
2026-06-03 06:17:21,622 - cnv_pipe.batch.run_model - INFO - Cluster 979 finished in 317.98 seconds. Status: SUCCESS