mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7w5vzrl0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:05:37,550 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:05:38,491 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:05:38,687 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:24,916 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:06:25,178 - cnv_pipe.batch.run_model - INFO - Processing cluster 59 with 111 probes
2026-06-03 06:06:25,585 - cnv_pipe.batch.run_model.cluster59 - INFO - Child process started for cluster 59 with 111 probes
2026-06-03 06:09:34,557 - cnv_pipe.batch.run_model.cluster59 - INFO - Child process finished cluster 59. Wrote cluster_59_samples.csv and cluster_59_params.csv
2026-06-03 06:09:34,558 - cnv_pipe.batch.run_model - INFO - Cluster 59 finished in 189.38 seconds. Status: SUCCESS