File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/3a534f4498750a5bc3c15018f84e64/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dmcp45bs because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:11:59,664 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:12:00,574 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:12:00,763 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:12:48,690 - cnv_pipe.batch.run_model - INFO - Loaded data with 188 samples
2026-06-03 06:12:48,930 - cnv_pipe.batch.run_model - INFO - Processing cluster 1114 with 178 probes
2026-06-03 06:12:49,354 - cnv_pipe.batch.run_model.cluster1114 - INFO - Child process started for cluster 1114 with 178 probes
2026-06-03 06:18:04,885 - cnv_pipe.batch.run_model.cluster1114 - INFO - Child process finished cluster 1114. Wrote cluster_1114_samples.csv and cluster_1114_params.csv
2026-06-03 06:18:04,888 - cnv_pipe.batch.run_model - INFO - Cluster 1114 finished in 315.96 seconds. Status: SUCCESS