File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/83a2a44c5bbef2e9852eb66ca90d3d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8tp42mwv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:56:59,754 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:57:00,538 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:57:00,708 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:57:41,813 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:57:41,901 - cnv_pipe.batch.run_model - INFO - Processing cluster 905 with 176 probes
2026-06-03 05:57:42,371 - cnv_pipe.batch.run_model.cluster905 - INFO - Child process started for cluster 905 with 176 probes
2026-06-03 06:01:39,622 - cnv_pipe.batch.run_model.cluster905 - INFO - Child process finished cluster 905. Wrote cluster_905_samples.csv and cluster_905_params.csv
2026-06-03 06:01:39,624 - cnv_pipe.batch.run_model - INFO - Cluster 905 finished in 237.72 seconds. Status: SUCCESS