File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/4e0cd2092915c14f7a04c0b1138fc1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y4t2pk1f because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:56:27,929 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:56:28,717 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:56:28,888 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:57:12,377 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:57:12,628 - cnv_pipe.batch.run_model - INFO - Processing cluster 823 with 193 probes
2026-06-03 05:57:13,002 - cnv_pipe.batch.run_model.cluster823 - INFO - Child process started for cluster 823 with 193 probes
2026-06-03 06:01:38,587 - cnv_pipe.batch.run_model.cluster823 - INFO - Child process finished cluster 823. Wrote cluster_823_samples.csv and cluster_823_params.csv
2026-06-03 06:01:38,590 - cnv_pipe.batch.run_model - INFO - Cluster 823 finished in 265.96 seconds. Status: SUCCESS