mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zhbrhuu9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:56:13,450 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:56:14,236 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:56:14,402 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:56:54,221 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:56:54,304 - cnv_pipe.batch.run_model - INFO - Processing cluster 780 with 110 probes
2026-06-03 05:56:54,676 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process started for cluster 780 with 110 probes
2026-06-03 05:59:36,135 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process finished cluster 780. Wrote cluster_780_samples.csv and cluster_780_params.csv
2026-06-03 05:59:36,136 - cnv_pipe.batch.run_model - INFO - Cluster 780 finished in 161.83 seconds. Status: SUCCESS