File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/72fa9d09870f6d85cc4c7ba010cd2a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h57nj7r6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:56:59,505 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:57:00,290 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:57:00,463 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:57:40,491 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:57:40,578 - cnv_pipe.batch.run_model - INFO - Processing cluster 910 with 181 probes
2026-06-03 05:57:41,069 - cnv_pipe.batch.run_model.cluster910 - INFO - Child process started for cluster 910 with 181 probes
2026-06-03 06:01:47,841 - cnv_pipe.batch.run_model.cluster910 - INFO - Child process finished cluster 910. Wrote cluster_910_samples.csv and cluster_910_params.csv
2026-06-03 06:01:47,843 - cnv_pipe.batch.run_model - INFO - Cluster 910 finished in 247.26 seconds. Status: SUCCESS