mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-90zm0nit because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:51:26,254 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:51:27,057 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:51:27,225 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:52:07,844 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:52:08,061 - cnv_pipe.batch.run_model - INFO - Processing cluster 8 with 199 probes
2026-06-03 05:52:08,435 - cnv_pipe.batch.run_model.cluster8 - INFO - Child process started for cluster 8 with 199 probes
2026-06-03 05:56:57,162 - cnv_pipe.batch.run_model.cluster8 - INFO - Child process finished cluster 8. Wrote cluster_8_samples.csv and cluster_8_params.csv
2026-06-03 05:56:57,170 - cnv_pipe.batch.run_model - INFO - Cluster 8 finished in 289.11 seconds. Status: SUCCESS