mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ioae892e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:56:20,654 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:56:21,438 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:56:21,604 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:57:02,000 - cnv_pipe.batch.run_model - INFO - Loaded data with 180 samples
2026-06-03 05:57:02,206 - cnv_pipe.batch.run_model - INFO - Processing cluster 799 with 125 probes
2026-06-03 05:57:02,573 - cnv_pipe.batch.run_model.cluster799 - INFO - Child process started for cluster 799 with 125 probes
2026-06-03 06:00:00,360 - cnv_pipe.batch.run_model.cluster799 - INFO - Child process finished cluster 799. Wrote cluster_799_samples.csv and cluster_799_params.csv
2026-06-03 06:00:00,361 - cnv_pipe.batch.run_model - INFO - Cluster 799 finished in 178.16 seconds. Status: SUCCESS