mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nv87ezmk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:10,638 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:11,485 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:11,661 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:02:54,113 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:02:54,345 - cnv_pipe.batch.run_model - INFO - Processing cluster 865 with 137 probes
2026-06-03 06:02:54,740 - cnv_pipe.batch.run_model.cluster865 - INFO - Child process started for cluster 865 with 137 probes
2026-06-03 06:06:40,094 - cnv_pipe.batch.run_model.cluster865 - INFO - Child process finished cluster 865. Wrote cluster_865_samples.csv and cluster_865_params.csv
2026-06-03 06:06:40,096 - cnv_pipe.batch.run_model - INFO - Cluster 865 finished in 225.75 seconds. Status: SUCCESS