mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2m3i66gd because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:15:37,300 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:15:38,166 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:15:38,343 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:16:21,694 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:16:21,789 - cnv_pipe.batch.run_model - INFO - Processing cluster 2126 with 186 probes
2026-06-03 06:16:22,202 - cnv_pipe.batch.run_model.cluster2126 - INFO - Child process started for cluster 2126 with 186 probes
2026-06-03 06:20:56,568 - cnv_pipe.batch.run_model.cluster2126 - INFO - Child process finished cluster 2126. Wrote cluster_2126_samples.csv and cluster_2126_params.csv
2026-06-03 06:20:56,570 - cnv_pipe.batch.run_model - INFO - Cluster 2126 finished in 274.78 seconds. Status: SUCCESS