mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rgyl60jo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:20,669 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:21,602 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:21,783 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:03:05,711 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:03:05,949 - cnv_pipe.batch.run_model - INFO - Processing cluster 906 with 166 probes
2026-06-03 06:03:06,358 - cnv_pipe.batch.run_model.cluster906 - INFO - Child process started for cluster 906 with 166 probes
2026-06-03 06:07:24,780 - cnv_pipe.batch.run_model.cluster906 - INFO - Child process finished cluster 906. Wrote cluster_906_samples.csv and cluster_906_params.csv
2026-06-03 06:07:24,782 - cnv_pipe.batch.run_model - INFO - Cluster 906 finished in 258.83 seconds. Status: SUCCESS