mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zwfslv9f because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:58:07,153 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:58:07,940 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:58:08,107 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:58:49,624 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 05:58:49,846 - cnv_pipe.batch.run_model - INFO - Processing cluster 99 with 200 probes
2026-06-03 05:58:50,245 - cnv_pipe.batch.run_model.cluster99 - INFO - Child process started for cluster 99 with 200 probes
2026-06-03 06:03:23,980 - cnv_pipe.batch.run_model.cluster99 - INFO - Child process finished cluster 99. Wrote cluster_99_samples.csv and cluster_99_params.csv
2026-06-03 06:03:23,982 - cnv_pipe.batch.run_model - INFO - Cluster 99 finished in 274.14 seconds. Status: SUCCESS