mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pkmo6qi7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:36,961 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:37,755 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:37,923 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:03:20,373 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:03:20,584 - cnv_pipe.batch.run_model - INFO - Processing cluster 993 with 163 probes
2026-06-03 06:03:20,977 - cnv_pipe.batch.run_model.cluster993 - INFO - Child process started for cluster 993 with 163 probes
2026-06-03 06:07:44,603 - cnv_pipe.batch.run_model.cluster993 - INFO - Child process finished cluster 993. Wrote cluster_993_samples.csv and cluster_993_params.csv
2026-06-03 06:07:44,605 - cnv_pipe.batch.run_model - INFO - Cluster 993 finished in 264.02 seconds. Status: SUCCESS