mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cp76on59 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:01:41,379 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:01:42,216 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:01:42,386 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:02:25,583 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:02:25,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 780 with 110 probes
2026-06-03 06:02:26,206 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process started for cluster 780 with 110 probes
2026-06-03 06:05:33,383 - cnv_pipe.batch.run_model.cluster780 - INFO - Child process finished cluster 780. Wrote cluster_780_samples.csv and cluster_780_params.csv
2026-06-03 06:05:33,385 - cnv_pipe.batch.run_model - INFO - Cluster 780 finished in 187.58 seconds. Status: SUCCESS