mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nudjqmcv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:07,043 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:07,884 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:08,060 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:02:50,890 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:02:51,111 - cnv_pipe.batch.run_model - INFO - Processing cluster 853 with 192 probes
2026-06-03 06:02:51,519 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process started for cluster 853 with 192 probes
2026-06-03 06:07:29,809 - cnv_pipe.batch.run_model.cluster853 - INFO - Child process finished cluster 853. Wrote cluster_853_samples.csv and cluster_853_params.csv
2026-06-03 06:07:29,811 - cnv_pipe.batch.run_model - INFO - Cluster 853 finished in 278.70 seconds. Status: SUCCESS