mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-had2wxy7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:07,660 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:08,523 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:08,699 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:02:54,807 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:02:55,079 - cnv_pipe.batch.run_model - INFO - Processing cluster 854 with 103 probes
2026-06-03 06:02:55,485 - cnv_pipe.batch.run_model.cluster854 - INFO - Child process started for cluster 854 with 103 probes
2026-06-03 06:05:42,538 - cnv_pipe.batch.run_model.cluster854 - INFO - Child process finished cluster 854. Wrote cluster_854_samples.csv and cluster_854_params.csv
2026-06-03 06:05:42,539 - cnv_pipe.batch.run_model - INFO - Cluster 854 finished in 167.46 seconds. Status: SUCCESS