mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c5onm4g4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:02:41,153 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:02:42,063 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:02:42,244 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:03:27,926 - cnv_pipe.batch.run_model - INFO - Loaded data with 178 samples
2026-06-03 06:03:28,158 - cnv_pipe.batch.run_model - INFO - Processing cluster 1002 with 188 probes
2026-06-03 06:03:28,537 - cnv_pipe.batch.run_model.cluster1002 - INFO - Child process started for cluster 1002 with 188 probes
2026-06-03 06:08:19,503 - cnv_pipe.batch.run_model.cluster1002 - INFO - Child process finished cluster 1002. Wrote cluster_1002_samples.csv and cluster_1002_params.csv
2026-06-03 06:08:19,505 - cnv_pipe.batch.run_model - INFO - Cluster 1002 finished in 291.35 seconds. Status: SUCCESS