mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-c1b9t308 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:31,636 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:32,473 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:32,641 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:17,570 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:17,666 - cnv_pipe.batch.run_model - INFO - Processing cluster 664 with 154 probes
2026-06-03 06:07:18,065 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process started for cluster 664 with 154 probes
2026-06-03 06:11:36,192 - cnv_pipe.batch.run_model.cluster664 - INFO - Child process finished cluster 664. Wrote cluster_664_samples.csv and cluster_664_params.csv
2026-06-03 06:11:36,194 - cnv_pipe.batch.run_model - INFO - Cluster 664 finished in 258.53 seconds. Status: SUCCESS