mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r3pvb55n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:05:57,977 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:05:58,855 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:05:59,038 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:47,052 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:06:47,143 - cnv_pipe.batch.run_model - INFO - Processing cluster 536 with 164 probes
2026-06-03 06:06:47,571 - cnv_pipe.batch.run_model.cluster536 - INFO - Child process started for cluster 536 with 164 probes
2026-06-03 06:11:22,319 - cnv_pipe.batch.run_model.cluster536 - INFO - Child process finished cluster 536. Wrote cluster_536_samples.csv and cluster_536_params.csv
2026-06-03 06:11:22,321 - cnv_pipe.batch.run_model - INFO - Cluster 536 finished in 275.18 seconds. Status: SUCCESS