mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ng2o680t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:37,381 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:38,242 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:38,419 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:24,377 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:24,621 - cnv_pipe.batch.run_model - INFO - Processing cluster 675 with 106 probes
2026-06-03 06:07:25,021 - cnv_pipe.batch.run_model.cluster675 - INFO - Child process started for cluster 675 with 106 probes
2026-06-03 06:10:33,589 - cnv_pipe.batch.run_model.cluster675 - INFO - Child process finished cluster 675. Wrote cluster_675_samples.csv and cluster_675_params.csv
2026-06-03 06:10:33,590 - cnv_pipe.batch.run_model - INFO - Cluster 675 finished in 188.97 seconds. Status: SUCCESS