mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xlv77u5v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:03:56,311 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:03:57,162 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:03:57,346 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:04:41,870 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:04:42,083 - cnv_pipe.batch.run_model - INFO - Processing cluster 69 with 171 probes
2026-06-03 06:04:42,464 - cnv_pipe.batch.run_model.cluster69 - INFO - Child process started for cluster 69 with 171 probes
2026-06-03 06:09:11,232 - cnv_pipe.batch.run_model.cluster69 - INFO - Child process finished cluster 69. Wrote cluster_69_samples.csv and cluster_69_params.csv
2026-06-03 06:09:11,235 - cnv_pipe.batch.run_model - INFO - Cluster 69 finished in 269.15 seconds. Status: SUCCESS