mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kyyayacw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:11,472 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:12,367 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:12,547 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:59,470 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:06:59,742 - cnv_pipe.batch.run_model - INFO - Processing cluster 593 with 178 probes
2026-06-03 06:07:00,159 - cnv_pipe.batch.run_model.cluster593 - INFO - Child process started for cluster 593 with 178 probes
2026-06-03 06:11:47,560 - cnv_pipe.batch.run_model.cluster593 - INFO - Child process finished cluster 593. Wrote cluster_593_samples.csv and cluster_593_params.csv
2026-06-03 06:11:47,563 - cnv_pipe.batch.run_model - INFO - Cluster 593 finished in 287.82 seconds. Status: SUCCESS