mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e5itri2b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:39,912 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:40,804 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:40,997 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:26,956 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:27,220 - cnv_pipe.batch.run_model - INFO - Processing cluster 690 with 151 probes
2026-06-03 06:07:27,630 - cnv_pipe.batch.run_model.cluster690 - INFO - Child process started for cluster 690 with 151 probes
2026-06-03 06:11:30,811 - cnv_pipe.batch.run_model.cluster690 - INFO - Child process finished cluster 690. Wrote cluster_690_samples.csv and cluster_690_params.csv
2026-06-03 06:11:30,813 - cnv_pipe.batch.run_model - INFO - Cluster 690 finished in 243.59 seconds. Status: SUCCESS