File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ed/31a1cb3f49af14f1e35a1d493e26e6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eftgwaqo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:08,372 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:09,221 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:09,390 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:53,960 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:54,196 - cnv_pipe.batch.run_model - INFO - Processing cluster 785 with 165 probes
2026-06-03 06:07:54,638 - cnv_pipe.batch.run_model.cluster785 - INFO - Child process started for cluster 785 with 165 probes
2026-06-03 06:12:28,047 - cnv_pipe.batch.run_model.cluster785 - INFO - Child process finished cluster 785. Wrote cluster_785_samples.csv and cluster_785_params.csv
2026-06-03 06:12:28,050 - cnv_pipe.batch.run_model - INFO - Cluster 785 finished in 273.85 seconds. Status: SUCCESS