File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/babdd4ef20fd1364d896d702df40ab/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t_yzzdfy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:17,739 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:18,609 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:18,782 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:01,577 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:08:01,792 - cnv_pipe.batch.run_model - INFO - Processing cluster 833 with 183 probes
2026-06-03 06:08:02,196 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process started for cluster 833 with 183 probes
2026-06-03 06:12:23,489 - cnv_pipe.batch.run_model.cluster833 - INFO - Child process finished cluster 833. Wrote cluster_833_samples.csv and cluster_833_params.csv
2026-06-03 06:12:23,490 - cnv_pipe.batch.run_model - INFO - Cluster 833 finished in 261.70 seconds. Status: SUCCESS