File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/90418beeecb5c9822a415555bb16ac/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9uiytbmg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:08:15,604 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:08:16,522 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:08:16,715 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:09:03,594 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:09:03,698 - cnv_pipe.batch.run_model - INFO - Processing cluster 1089 with 155 probes
2026-06-03 06:09:04,126 - cnv_pipe.batch.run_model.cluster1089 - INFO - Child process started for cluster 1089 with 155 probes
2026-06-03 06:13:35,806 - cnv_pipe.batch.run_model.cluster1089 - INFO - Child process finished cluster 1089. Wrote cluster_1089_samples.csv and cluster_1089_params.csv
2026-06-03 06:13:35,808 - cnv_pipe.batch.run_model - INFO - Cluster 1089 finished in 272.11 seconds. Status: SUCCESS