mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cyct33p3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:57,842 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:58,714 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:58,893 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:45,884 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:46,129 - cnv_pipe.batch.run_model - INFO - Processing cluster 749 with 135 probes
2026-06-03 06:07:46,541 - cnv_pipe.batch.run_model.cluster749 - INFO - Child process started for cluster 749 with 135 probes
2026-06-03 06:11:47,345 - cnv_pipe.batch.run_model.cluster749 - INFO - Child process finished cluster 749. Wrote cluster_749_samples.csv and cluster_749_params.csv
2026-06-03 06:11:47,347 - cnv_pipe.batch.run_model - INFO - Cluster 749 finished in 241.22 seconds. Status: SUCCESS