mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nywppar4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:04:00,203 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:04:01,044 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:04:01,212 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:04:50,472 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:04:50,754 - cnv_pipe.batch.run_model - INFO - Processing cluster 92 with 185 probes
2026-06-03 06:04:51,165 - cnv_pipe.batch.run_model.cluster92 - INFO - Child process started for cluster 92 with 185 probes
2026-06-03 06:09:54,546 - cnv_pipe.batch.run_model.cluster92 - INFO - Child process finished cluster 92. Wrote cluster_92_samples.csv and cluster_92_params.csv
2026-06-03 06:09:54,548 - cnv_pipe.batch.run_model - INFO - Cluster 92 finished in 303.79 seconds. Status: SUCCESS