mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-w4ymxvru because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:02,456 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:03,251 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:03,415 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:43,218 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:06:43,409 - cnv_pipe.batch.run_model - INFO - Processing cluster 559 with 97 probes
2026-06-03 06:06:43,792 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process started for cluster 559 with 97 probes
2026-06-03 06:09:23,647 - cnv_pipe.batch.run_model.cluster559 - INFO - Child process finished cluster 559. Wrote cluster_559_samples.csv and cluster_559_params.csv
2026-06-03 06:09:23,648 - cnv_pipe.batch.run_model - INFO - Cluster 559 finished in 160.24 seconds. Status: SUCCESS