File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/6af6bfbab49c6e3b550362430252c4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8hr8q30t because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:47,333 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:48,213 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:48,402 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:36,658 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:36,771 - cnv_pipe.batch.run_model - INFO - Processing cluster 711 with 186 probes
2026-06-03 06:07:37,327 - cnv_pipe.batch.run_model.cluster711 - INFO - Child process started for cluster 711 with 186 probes
2026-06-03 06:12:32,298 - cnv_pipe.batch.run_model.cluster711 - INFO - Child process finished cluster 711. Wrote cluster_711_samples.csv and cluster_711_params.csv
2026-06-03 06:12:32,304 - cnv_pipe.batch.run_model - INFO - Cluster 711 finished in 295.53 seconds. Status: SUCCESS