mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-a1w7qluf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:39,647 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:40,563 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:40,737 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:25,038 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:25,131 - cnv_pipe.batch.run_model - INFO - Processing cluster 689 with 192 probes
2026-06-03 06:07:25,655 - cnv_pipe.batch.run_model.cluster689 - INFO - Child process started for cluster 689 with 192 probes
2026-06-03 06:12:49,027 - cnv_pipe.batch.run_model.cluster689 - INFO - Child process finished cluster 689. Wrote cluster_689_samples.csv and cluster_689_params.csv
2026-06-03 06:12:49,030 - cnv_pipe.batch.run_model - INFO - Cluster 689 finished in 323.90 seconds. Status: SUCCESS