mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-khgdw8fv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:53,727 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:54,645 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:54,825 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:41,208 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:08:41,429 - cnv_pipe.batch.run_model - INFO - Processing cluster 988 with 172 probes
2026-06-03 06:08:41,845 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process started for cluster 988 with 172 probes
2026-06-03 06:13:39,000 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process finished cluster 988. Wrote cluster_988_samples.csv and cluster_988_params.csv
2026-06-03 06:13:39,002 - cnv_pipe.batch.run_model - INFO - Cluster 988 finished in 297.57 seconds. Status: SUCCESS