File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/5faa7f4bf5947acac10f00173d17a6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jy5fbg8u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:32,801 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:34,242 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:34,556 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:49,010 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:49,145 - cnv_pipe.batch.run_model - INFO - Processing cluster 644 with 184 probes
2026-06-03 06:07:49,788 - cnv_pipe.batch.run_model.cluster644 - INFO - Child process started for cluster 644 with 184 probes
2026-06-03 06:14:42,801 - cnv_pipe.batch.run_model.cluster644 - INFO - Child process finished cluster 644. Wrote cluster_644_samples.csv and cluster_644_params.csv
2026-06-03 06:14:42,804 - cnv_pipe.batch.run_model - INFO - Cluster 644 finished in 413.66 seconds. Status: SUCCESS