mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j_3sck5v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:29,001 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:29,864 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:30,034 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:16,212 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:16,307 - cnv_pipe.batch.run_model - INFO - Processing cluster 653 with 166 probes
2026-06-03 06:07:16,694 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process started for cluster 653 with 166 probes
2026-06-03 06:11:42,993 - cnv_pipe.batch.run_model.cluster653 - INFO - Child process finished cluster 653. Wrote cluster_653_samples.csv and cluster_653_params.csv
2026-06-03 06:11:42,996 - cnv_pipe.batch.run_model - INFO - Cluster 653 finished in 266.69 seconds. Status: SUCCESS