mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-54zghfeh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:10,743 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:11,666 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:11,861 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:06:57,048 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:06:57,265 - cnv_pipe.batch.run_model - INFO - Processing cluster 586 with 186 probes
2026-06-03 06:06:57,648 - cnv_pipe.batch.run_model.cluster586 - INFO - Child process started for cluster 586 with 186 probes
2026-06-03 06:11:53,208 - cnv_pipe.batch.run_model.cluster586 - INFO - Child process finished cluster 586. Wrote cluster_586_samples.csv and cluster_586_params.csv
2026-06-03 06:11:53,214 - cnv_pipe.batch.run_model - INFO - Cluster 586 finished in 295.95 seconds. Status: SUCCESS