File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bc/9a9a4fa29517ac4996bc3de6be89d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-66fy9427 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:18,324 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:19,210 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:19,392 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:04,921 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:08:05,012 - cnv_pipe.batch.run_model - INFO - Processing cluster 836 with 193 probes
2026-06-03 06:08:05,440 - cnv_pipe.batch.run_model.cluster836 - INFO - Child process started for cluster 836 with 193 probes
2026-06-03 06:13:08,100 - cnv_pipe.batch.run_model.cluster836 - INFO - Child process finished cluster 836. Wrote cluster_836_samples.csv and cluster_836_params.csv
2026-06-03 06:13:08,102 - cnv_pipe.batch.run_model - INFO - Cluster 836 finished in 303.09 seconds. Status: SUCCESS