File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d7/63fdf833741e325bb8ce98643fc576/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f_ohd8d6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:28,556 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:29,446 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:29,628 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:14,366 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:08:14,587 - cnv_pipe.batch.run_model - INFO - Processing cluster 883 with 193 probes
2026-06-03 06:08:14,985 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process started for cluster 883 with 193 probes
2026-06-03 06:13:23,087 - cnv_pipe.batch.run_model.cluster883 - INFO - Child process finished cluster 883. Wrote cluster_883_samples.csv and cluster_883_params.csv
2026-06-03 06:13:23,090 - cnv_pipe.batch.run_model - INFO - Cluster 883 finished in 308.50 seconds. Status: SUCCESS