mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yhicagmx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:06:23,359 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:06:24,277 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:06:24,462 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:10,289 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:10,535 - cnv_pipe.batch.run_model - INFO - Processing cluster 627 with 128 probes
2026-06-03 06:07:10,979 - cnv_pipe.batch.run_model.cluster627 - INFO - Child process started for cluster 627 with 128 probes
2026-06-03 06:10:59,999 - cnv_pipe.batch.run_model.cluster627 - INFO - Child process finished cluster 627. Wrote cluster_627_samples.csv and cluster_627_params.csv
2026-06-03 06:11:00,001 - cnv_pipe.batch.run_model - INFO - Cluster 627 finished in 229.47 seconds. Status: SUCCESS