File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/d06e433f7ddf9b34a02587a105ed72/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_gfzw5sf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:03,397 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:04,247 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:04,424 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:07:48,554 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:07:48,656 - cnv_pipe.batch.run_model - INFO - Processing cluster 771 with 200 probes
2026-06-03 06:07:49,217 - cnv_pipe.batch.run_model.cluster771 - INFO - Child process started for cluster 771 with 200 probes
2026-06-03 06:13:01,565 - cnv_pipe.batch.run_model.cluster771 - INFO - Child process finished cluster 771. Wrote cluster_771_samples.csv and cluster_771_params.csv
2026-06-03 06:13:01,567 - cnv_pipe.batch.run_model - INFO - Cluster 771 finished in 312.91 seconds. Status: SUCCESS