mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mkcy7xc6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:03:58,428 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:03:59,339 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:03:59,515 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:04:46,434 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:04:46,671 - cnv_pipe.batch.run_model - INFO - Processing cluster 80 with 195 probes
2026-06-03 06:04:47,083 - cnv_pipe.batch.run_model.cluster80 - INFO - Child process started for cluster 80 with 195 probes
2026-06-03 06:09:48,872 - cnv_pipe.batch.run_model.cluster80 - INFO - Child process finished cluster 80. Wrote cluster_80_samples.csv and cluster_80_params.csv
2026-06-03 06:09:48,875 - cnv_pipe.batch.run_model - INFO - Cluster 80 finished in 302.20 seconds. Status: SUCCESS