mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-urbcis6z because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:07:38,338 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:07:39,197 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:07:39,364 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:08:25,372 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:08:25,480 - cnv_pipe.batch.run_model - INFO - Processing cluster 928 with 184 probes
2026-06-03 06:08:26,043 - cnv_pipe.batch.run_model.cluster928 - INFO - Child process started for cluster 928 with 184 probes
2026-06-03 06:13:20,714 - cnv_pipe.batch.run_model.cluster928 - INFO - Child process finished cluster 928. Wrote cluster_928_samples.csv and cluster_928_params.csv
2026-06-03 06:13:20,716 - cnv_pipe.batch.run_model - INFO - Cluster 928 finished in 295.24 seconds. Status: SUCCESS