mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-979b2vjk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 06:03:57,702 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 06:03:59,169 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 06:03:59,481 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 06:05:08,184 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 06:05:08,524 - cnv_pipe.batch.run_model - INFO - Processing cluster 57 with 171 probes
2026-06-03 06:05:09,191 - cnv_pipe.batch.run_model.cluster57 - INFO - Child process started for cluster 57 with 171 probes
2026-06-03 06:11:15,406 - cnv_pipe.batch.run_model.cluster57 - INFO - Child process finished cluster 57. Wrote cluster_57_samples.csv and cluster_57_params.csv
2026-06-03 06:11:15,409 - cnv_pipe.batch.run_model - INFO - Cluster 57 finished in 366.88 seconds. Status: SUCCESS