mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5x_1plot because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:26,674 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:27,797 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:28,017 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:20,862 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:21,158 - cnv_pipe.batch.run_model - INFO - Processing cluster 466 with 196 probes
2026-06-03 05:43:21,636 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process started for cluster 466 with 196 probes
2026-06-03 05:49:06,361 - cnv_pipe.batch.run_model.cluster466 - INFO - Child process finished cluster 466. Wrote cluster_466_samples.csv and cluster_466_params.csv
2026-06-03 05:49:06,363 - cnv_pipe.batch.run_model - INFO - Cluster 466 finished in 345.21 seconds. Status: SUCCESS