mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dnlbfmu1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:54,321 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:55,315 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:55,502 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:44,984 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:45,296 - cnv_pipe.batch.run_model - INFO - Processing cluster 547 with 157 probes
2026-06-03 05:43:45,737 - cnv_pipe.batch.run_model.cluster547 - INFO - Child process started for cluster 547 with 157 probes
2026-06-03 05:48:35,061 - cnv_pipe.batch.run_model.cluster547 - INFO - Child process finished cluster 547. Wrote cluster_547_samples.csv and cluster_547_params.csv
2026-06-03 05:48:35,065 - cnv_pipe.batch.run_model - INFO - Cluster 547 finished in 289.77 seconds. Status: SUCCESS