mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7rj1g1ee because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:42:44,541 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:42:45,742 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:42:45,969 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:43:40,039 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:43:40,165 - cnv_pipe.batch.run_model - INFO - Processing cluster 526 with 144 probes
2026-06-03 05:43:40,841 - cnv_pipe.batch.run_model.cluster526 - INFO - Child process started for cluster 526 with 144 probes
2026-06-03 05:47:39,597 - cnv_pipe.batch.run_model.cluster526 - INFO - Child process finished cluster 526. Wrote cluster_526_samples.csv and cluster_526_params.csv
2026-06-03 05:47:39,599 - cnv_pipe.batch.run_model - INFO - Cluster 526 finished in 239.43 seconds. Status: SUCCESS