File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/58/35dca0ed0dc4d74717a68ba9811621/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-03icev0a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:45:57,060 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:45:58,121 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:45:58,322 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:46:47,118 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:46:47,220 - cnv_pipe.batch.run_model - INFO - Processing cluster 1195 with 199 probes
2026-06-03 05:46:47,816 - cnv_pipe.batch.run_model.cluster1195 - INFO - Child process started for cluster 1195 with 199 probes
2026-06-03 05:52:08,781 - cnv_pipe.batch.run_model.cluster1195 - INFO - Child process finished cluster 1195. Wrote cluster_1195_samples.csv and cluster_1195_params.csv
2026-06-03 05:52:08,784 - cnv_pipe.batch.run_model - INFO - Cluster 1195 finished in 321.56 seconds. Status: SUCCESS