mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2gygskak because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:44:05,664 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:44:06,707 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:44:06,902 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:44:59,090 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:44:59,214 - cnv_pipe.batch.run_model - INFO - Processing cluster 769 with 193 probes
2026-06-03 05:44:59,930 - cnv_pipe.batch.run_model.cluster769 - INFO - Child process started for cluster 769 with 193 probes
2026-06-03 05:50:27,867 - cnv_pipe.batch.run_model.cluster769 - INFO - Child process finished cluster 769. Wrote cluster_769_samples.csv and cluster_769_params.csv
2026-06-03 05:50:27,869 - cnv_pipe.batch.run_model - INFO - Cluster 769 finished in 328.66 seconds. Status: SUCCESS