mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ryd4bwir because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 05:40:26,479 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 05:40:27,613 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 05:40:27,823 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 05:41:24,099 - cnv_pipe.batch.run_model - INFO - Loaded data with 187 samples
2026-06-03 05:41:24,466 - cnv_pipe.batch.run_model - INFO - Processing cluster 96 with 194 probes
2026-06-03 05:41:24,953 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process started for cluster 96 with 194 probes
2026-06-03 05:47:15,839 - cnv_pipe.batch.run_model.cluster96 - INFO - Child process finished cluster 96. Wrote cluster_96_samples.csv and cluster_96_params.csv
2026-06-03 05:47:15,842 - cnv_pipe.batch.run_model - INFO - Cluster 96 finished in 351.38 seconds. Status: SUCCESS